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This model represents a concentration gradient of RanGTP across the nuclear envelope. This gradient is generated by distribution of regulators of RanGTPase.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_gtp",
"label": "Initial Model State Gtp",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_model_state_gtp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GTP`."
},
{
"name": "initial_ran_gdp_cy",
"label": "Initial Ran Gdp Cy",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_ran_gdp_cy",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RanGDP_cy`."
},
{
"name": "initial_ran_bp1",
"label": "Initial Ran BP1",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_ran_bp1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RanBP1`."
},
{
"name": "initial_model_state_gdp",
"label": "Initial Model State Gdp",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_model_state_gdp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GDP`."
},
{
"name": "initial_ran_gap",
"label": "Initial Ran Gap",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_ran_gap",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RanGAP`."
},
{
"name": "initial_rcc1",
"label": "Initial Rcc1",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.initial_rcc1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RCC1`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.species_labels"
},
{
"name": "gtp",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.gtp"
},
{
"name": "ran_gdp_cy",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.ran_gdp_cy"
},
{
"name": "ran_bp1",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.ran_bp1"
},
{
"name": "gdp",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.gdp"
},
{
"name": "ran_gap",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.ran_gap"
},
{
"name": "rcc1",
"maps_to": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.rcc1"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Gorlich2003 Rangtp Gradient Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model_state"
],
"from": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model_summary"
],
"from": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model_species_labels"
],
"from": "systemsbiology_sbml_g_rlich2003_rangtp_gradient_biomd0000000192_model.species_labels"
}
],
"package": "gorlich2003-rangtp-gradient",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model represents a concentration gradient of RanGTP across the nuclear envelope. This gradient is generated by distribution of regulators of RanGTPase.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagegorlich2003-rangtp-gradient
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother