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Single-model lab wrapper for Malkov2020 - SEIRS model of COVID-19 transmission with time-varying R values and reinfection. Epidemiological models of COVID-19 transmission assume that recovered individuals have a fully pro- tected immunity. To date, there is no definite answer about whether people who recover from COVID-19.
Manifest
{
"io": {
"inputs": [
{
"name": "transmission_rate",
"label": "Transmission Rate",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.transmission_rate"
},
{
"name": "recovery_rate",
"label": "Recovery Rate",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.recovery_rate"
},
{
"name": "incubation_rate",
"label": "Incubation Rate",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.incubation_rate"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.species_labels"
},
{
"name": "exposed",
"label": "Exposed",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.exposed"
},
{
"name": "infected",
"label": "Infected",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.infected"
},
{
"name": "susceptible",
"label": "Susceptible",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.susceptible"
},
{
"name": "recovered",
"label": "Recovered",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.recovered"
},
{
"name": "total_population",
"label": "Total population",
"maps_to": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.total_population"
}
]
},
"title": "Malkov2020 - SEIRS model of COVID-19 transmission with time-varying R values and reinfection Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model",
"parameters": {
"model_path": "data/BIOMD0000000980.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model_state"
],
"from": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model_summary"
],
"from": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model_species_labels"
],
"from": "epidemiology_sbml_malkov2020_seirs_model_of_covid_19_transmission_biomd0000000980_model.species_labels"
}
],
"package": "malkov2020-covid-seirs-time-varying-r",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Malkov2020 - SEIRS model of COVID-19 transmission with time-varying R values and reinfection. Epidemiological models of COVID-19 transmission assume that recovered individuals have a fully pro- tected immunity. To date, there is no definite answer about whether people who recover from COVID-19.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemalkov2020-covid-seirs-time-varying-r
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother