About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Clean Biosimulant lab for systems signaling model: Huarat2016 -Starvation-induced Ser/Thr protein kinase ArnS (Saci_1181) (Model 14). Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_source_defined_arns_state",
"label": "Initial source-defined ARNS state",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.initial_source_defined_arns_state",
"description": "Initial level of source-defined ARNS state. Maps to SBML symbol `saci1181`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "source_defined_nfb_state",
"label": "source-defined NFB state",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.source_defined_nfb_state",
"description": "source-defined NFB state. Maps to SBML symbol `nFB` and is emitted in native SBML units."
},
{
"name": "source_defined_nfb2_state",
"label": "source-defined NFB2 state",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.source_defined_nfb2_state",
"description": "source-defined NFB2 state. Maps to SBML symbol `nFB2` and is emitted in native SBML units."
},
{
"name": "source_defined_arns_state",
"label": "source-defined ARNS state",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.source_defined_arns_state",
"description": "source-defined ARNS state. Maps to SBML symbol `saci1181` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"camp-pka"
],
"title": "Huarat2016 -Starvation-induced Ser/Thr protein kinase ArnS (Saci_1181) (Model 14) Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model_state"
],
"from": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.state"
},
{
"to": [
"visualisation.signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model_summary"
],
"from": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model_species_labels"
],
"from": "signaling_sbml_huarat2016_starvation_induced_ser_thr_protein_ki_model1607210000_model.species_labels"
}
],
"package": "huarat2016-starvation-induced-ser-thr-protein-ki",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for systems signaling model: Huarat2016 -Starvation-induced Ser/Thr protein kinase ArnS (Saci_1181) (Model 14). Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagehuarat2016-starvation-induced-ser-thr-protein-ki
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicamp-pkavisualisationother