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SBML model exported from PottersWheel on 2007-09-19 15:35:47. The values for parameters and the inital concentrations of this model where directly provided by the main author: Parameter values paramet.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_intracellular_bsp",
"label": "Initial Intracellular Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_intracellular_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `BSP_cell`."
},
{
"name": "initial_free_intracellular_bsp",
"label": "Initial Free Intracellular Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_free_intracellular_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x3`."
},
{
"name": "initial_bound_intracellular_bsp",
"label": "Initial Bound Intracellular Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_bound_intracellular_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x4`."
},
{
"name": "initial_apical_bsp",
"label": "Initial Apical Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_apical_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x5`."
},
{
"name": "initial_free_basolateral_bsp",
"label": "Initial Free Basolateral Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_free_basolateral_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x1`."
},
{
"name": "initial_total_bsp",
"label": "Initial Total Bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.initial_total_bsp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `BSP_tot`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.species_labels"
},
{
"name": "intracellular_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.intracellular_bsp"
},
{
"name": "free_intracellular_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.free_intracellular_bsp"
},
{
"name": "bound_intracellular_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.bound_intracellular_bsp"
},
{
"name": "apical_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.apical_bsp"
},
{
"name": "free_basolateral_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.free_basolateral_bsp"
},
{
"name": "total_bsp",
"maps_to": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.total_bsp"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Bartholome2007 Mdckii Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model_state"
],
"from": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model_summary"
],
"from": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model_species_labels"
],
"from": "systemsbiology_sbml_bartholome2007_mdckii_biomd0000000197_model.species_labels"
}
],
"package": "bartholome2007-mdckii",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "SBML model exported from PottersWheel on 2007-09-19 15:35:47. The values for parameters and the inital concentrations of this model where directly provided by the main author: Parameter values paramet.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebartholome2007-mdckii
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother