Tyson2001_Cell_Cycle_Regulation Lab

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "cyclin_bt",
        "label": "Cyclin Bt",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cyclin_bt",
        "description": "Tracks Cyclin Bt in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cyclin_bt`."
      },
      {
        "name": "active_cdc20",
        "label": "Active Cdc20",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.active_cdc20",
        "description": "Tracks Active Cdc20 in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.active_cdc20`."
      },
      {
        "name": "cdh1_apc_c_activator",
        "label": "Cdh1 APC/C activator",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cdh1_apc_c_activator",
        "description": "Tracks Cdh1 APC/C activator in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cdh1_apc_c_activator`."
      },
      {
        "name": "model_state_m_m",
        "label": "Model state M (m)",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.model_state_m_m",
        "description": "Tracks Model state M (m) in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.model_state_m_m`."
      },
      {
        "name": "total_cdc20_apc_c_activator",
        "label": "Total Cdc20 APC/C activator",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.total_cdc20_apc_c_activator",
        "description": "Tracks Total Cdc20 APC/C activator in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.total_cdc20_apc_c_activator`."
      },
      {
        "name": "phosphorylated_ie",
        "label": "Phosphorylated IE",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.phosphorylated_ie",
        "description": "Tracks Phosphorylated IE in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.phosphorylated_ie`."
      },
      {
        "name": "total_cyclin_dependent_kinase_inhibitor",
        "label": "Total cyclin-dependent kinase inhibitor",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.total_cyclin_dependent_kinase_inhibitor",
        "description": "Tracks Total cyclin-dependent kinase inhibitor in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.total_cyclin_dependent_kinase_inhibitor`."
      },
      {
        "name": "model_state_sk",
        "label": "Model state SK",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.model_state_sk",
        "description": "Tracks Model state SK in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.model_state_sk`."
      },
      {
        "name": "cyclin_b",
        "label": "Cyclin B",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cyclin_b",
        "description": "Tracks Cyclin B in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.cyclin_b`."
      },
      {
        "name": "trimer_complex",
        "label": "Trimer complex",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.trimer_complex",
        "description": "Tracks Trimer complex in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.trimer_complex`."
      },
      {
        "name": "mad_spindle_checkpoint_signal",
        "label": "Mad spindle checkpoint signal",
        "maps_to": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.mad_spindle_checkpoint_signal",
        "description": "Tracks Mad spindle checkpoint signal in the lab model via `cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.mad_spindle_checkpoint_signal`."
      }
    ]
  },
  "title": "Tyson2001_Cell_Cycle_Regulation Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model_state"
      ],
      "from": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model_summary"
      ],
      "from": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model_species_labels"
      ],
      "from": "cellcycle_sbml_tyson2001_cell_cycle_regulation_biomd0000000195_model.species_labels"
    }
  ],
  "package": "tyson2001-budding-yeast-regulation",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "Single-model lab wrapper for Tyson2001_Cell_Cycle_Regulation. This model describes the budding yeast cell cycle model used in fig 8 a in Regulation of the eukaryotic cell cycle: molecular antagonism, hysteresis, and irreversible transitions. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
  "schema_version": "2.0"
}