Reed2008_Glutathione_Metabolism Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_cytosolic_tetrahydrofolate",
        "units": "native SBML value",
        "default": 4.670919668857204,
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.initial_cytosolic_tetrahydrofolate",
        "description": "Initial condition for cytosolic tetrahydrofolate. Maps to bundled SBML symbol `c_thf`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from Tellurium setup-time value because no explicit SBML initial value was available."
      },
      {
        "name": "initial_mitochondrial_tetrahydrofolate",
        "units": "native SBML value",
        "default": 21.075801087262693,
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.initial_mitochondrial_tetrahydrofolate",
        "description": "Initial condition for mitochondrial tetrahydrofolate. Maps to bundled SBML symbol `m_thf`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from Tellurium setup-time value because no explicit SBML initial value was available."
      },
      {
        "name": "initial_metabolic_pathway_state_3",
        "units": "native SBML value",
        "default": 4.4965335653401,
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.initial_metabolic_pathway_state_3",
        "description": "Initial condition for metabolic pathway state 3. Maps to bundled SBML symbol `c_5mf`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_metabolic_pathway_state_4",
        "units": "native SBML value",
        "default": 0.506278119133034,
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.initial_metabolic_pathway_state_4",
        "description": "Initial condition for metabolic pathway state 4. Maps to bundled SBML symbol `c_2cf`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_metabolic_pathway_state_5",
        "units": "native SBML value",
        "default": 0.278602708139276,
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.initial_metabolic_pathway_state_5",
        "description": "Initial condition for metabolic pathway state 5. Maps to bundled SBML symbol `c_1cf`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      }
    ],
    "outputs": [
      {
        "name": "cytosolic_tetrahydrofolate",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.cytosolic_tetrahydrofolate"
      },
      {
        "name": "mitochondrial_tetrahydrofolate",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.mitochondrial_tetrahydrofolate"
      },
      {
        "name": "metabolic_pathway_state_3",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.metabolic_pathway_state_3"
      },
      {
        "name": "metabolic_pathway_state_4",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.metabolic_pathway_state_4"
      },
      {
        "name": "metabolic_pathway_state_5",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.metabolic_pathway_state_5"
      },
      {
        "name": "observable_values",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.observable_values"
      },
      {
        "name": "run_summary",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.run_summary"
      },
      {
        "name": "observable_labels",
        "maps_to": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.observable_labels"
      }
    ]
  },
  "title": "Reed2008_Glutathione_Metabolism Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model",
      "parameters": {
        "model_path": "data/BIOMD0000000268.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model_observable_values"
      ],
      "from": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.observable_values"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model_run_summary"
      ],
      "from": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.run_summary"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model_observable_labels"
      ],
      "from": "metabolism_sbml_reed2008_glutathione_metabolism_biomd0000000268_model.observable_labels"
    }
  ],
  "package": "reed2008-glutathione-metabolism",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "This is the model described in the article: A mathematical model of glutathione metabolism. Michael C Reed, Rachel L Thomas, Jovana Pavisic, S.",
  "schema_version": "2.0"
}