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Mathematical model of the blood coagulation cascade including interaction of snake venom and antivenom. It can be used to explore systemsbiology tanos2008 blood coagulation and snake dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_va_xa",
"label": "Initial Va Xa",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_va_xa",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Va_Xa`."
},
{
"name": "initial_i_xa_vii_ia",
"label": "Initial I Xa Vii Ia",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_i_xa_vii_ia",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `IXa_VIIIa`."
},
{
"name": "initial_i_ia_tmod",
"label": "Initial I Ia Tmod",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_i_ia_tmod",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `IIa_Tmod`."
},
{
"name": "initial_model_state_fg",
"label": "Initial Model State Fg",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_model_state_fg",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Fg`."
},
{
"name": "initial_model_state_pg",
"label": "Initial Model State Pg",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_model_state_pg",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pg`."
},
{
"name": "initial_model_state_ii",
"label": "Initial Model State Ii",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.initial_model_state_ii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `II`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.species_labels"
},
{
"name": "va_xa",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.va_xa"
},
{
"name": "i_xa_vii_ia",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.i_xa_vii_ia"
},
{
"name": "i_ia_tmod",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.i_ia_tmod"
},
{
"name": "model_state_fg",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.model_state_fg"
},
{
"name": "model_state_pg",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.model_state_pg"
},
{
"name": "model_state_ii",
"maps_to": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.model_state_ii"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Tanos2008 Blood Coagulation And Snake Venom Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model_state"
],
"from": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model_summary"
],
"from": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model_species_labels"
],
"from": "systemsbiology_sbml_tanos2008_blood_coagulation_and_snake_venom_model1806150001_model.species_labels"
}
],
"package": "tanos2008-blood-coagulation-and-snake-venom",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Mathematical model of the blood coagulation cascade including interaction of snake venom and antivenom. It can be used to explore systemsbiology tanos2008 blood coagulation and snake dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagetanos2008-blood-coagulation-and-snake-venom
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother