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Source-faithful physiology lab for Lockwood, Ewy, Hermann, Holford, 2006. Public controls and outputs are mapped to real source symbols for pharmacokinetics.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_drug_clearance_cc",
"label": "Initial Drug Clearance Cc",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.initial_drug_clearance_cc",
"description": "Initial value for Drug Clearance Cc. Maps to source symbol `CC`. Units: mg_per_litre. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mg_per_litre"
]
},
{
"name": "initial_drug_clearance_pc",
"label": "Initial Drug Clearance Pc",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.initial_drug_clearance_pc",
"description": "Initial value for Drug Clearance Pc. Maps to source symbol `PC`. Units: mg_per_litre. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mg_per_litre"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.variable_labels"
},
{
"name": "drug_clearance_cc",
"label": "Drug Clearance Cc",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.drug_clearance_cc",
"description": "Drug Clearance Cc. Maps to source symbol `CC`. Units: mg_per_litre. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "drug_clearance_pc",
"label": "Drug Clearance Pc",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.drug_clearance_pc",
"description": "Drug Clearance Pc. Maps to source symbol `PC`. Units: mg_per_litre. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "model_state_a_in",
"label": "Model State A In (source A_in)",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.model_state_a_in",
"description": "Model State A In (source A_in). Maps to source symbol `A_in`. Units: mg. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "beta_a",
"label": "Beta A",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.beta_a",
"description": "Beta A. Maps to source symbol `beta_a`. Units: units_ml_per_ng. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ce_a",
"label": "Ce A",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.ce_a",
"description": "Ce A. Maps to source symbol `CeA`. Units: ng_per_ml. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cl_ic",
"label": "Cl Ic",
"maps_to": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.cl_ic",
"description": "Cl Ic. Maps to source symbol `CL_ic`. Units: litre_per_day. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Lockwood2006 - Application Clinical Trial Simulation Compare Proof Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model",
"parameters": {
"model_path": "data/lockwood_ewy_hermann_holford_2006.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model_state"
],
"from": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.state"
},
{
"to": [
"visualisation.physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model_summary"
],
"from": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model_trajectory"
],
"from": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model_variable_labels"
],
"from": "physiology_cellml_lockwood_ewy_hermann_holford_2006_lockwoodewyhermannholford2006_model.variable_labels"
}
],
"package": "lockwood2006-application-clinical-trial-simulation-compare-proof",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Lockwood, Ewy, Hermann, Holford, 2006. Public controls and outputs are mapped to real source symbols for pharmacokinetics.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagelockwood2006-application-clinical-trial-simulation-compare-proof
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother