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This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_d_glucose",
"label": "Initial D Glucose",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_d_glucose",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M_304`."
},
{
"name": "initial_phosphate",
"label": "Initial Phosphate",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_phosphate",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M_454`."
},
{
"name": "initial_nicotinamide_adenine_dinucleotide",
"label": "Initial Nicotinamide Adenine Dinucleotide",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_nicotinamide_adenine_dinucleotide",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M_411`."
},
{
"name": "initial_model_state_h",
"label": "Initial Model State H",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_model_state_h",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M_329`."
},
{
"name": "initial_model_state_atp",
"label": "Initial Model State ATP",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_model_state_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M_172`."
},
{
"name": "initial_yal038_w",
"label": "Initial Yal038 W",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.initial_yal038_w",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `E_726`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.species_labels"
},
{
"name": "d_glucose",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.d_glucose"
},
{
"name": "phosphate",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.phosphate"
},
{
"name": "nicotinamide_adenine_dinucleotide",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.nicotinamide_adenine_dinucleotide"
},
{
"name": "model_state_h",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.model_state_h"
},
{
"name": "atp",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.atp"
},
{
"name": "yal038_w",
"maps_to": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.yal038_w"
}
]
},
"tags": [
"metabolism",
"microbiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Li2010 Yeastglycolysis Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model_state"
],
"from": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model_summary"
],
"from": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model_species_labels"
],
"from": "systemsbiology_sbml_li2010_yeastglycolysis_model1012110001_model.species_labels"
}
],
"package": "li2010-yeastglycolysis",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageli2010-yeastglycolysis
Created2026-05-17
Updated2026-06-13
metabolismmicrobiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother