About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Proctor2017 - Identifying microRNA for muscleregeneration during ageing (Mir181_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mi. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_hox_a11",
"label": "Initial Hox A11",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_hox_a11",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `HoxA11`."
},
{
"name": "initial_sirt1",
"label": "Initial Sirt1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_sirt1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Sirt1`."
},
{
"name": "initial_fox_o3",
"label": "Initial Fox O3",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_fox_o3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FoxO3`."
},
{
"name": "initial_sirt1_mrna",
"label": "Initial Sirt1 MRNA",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_sirt1_mrna",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Sirt1_mRNA`."
},
{
"name": "initial_hox_a11_mrna",
"label": "Initial Hox A11 MRNA",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_hox_a11_mrna",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `HoxA11_mRNA`."
},
{
"name": "initial_fox_o3_sirt1",
"label": "Initial Fox O3 Sirt1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.initial_fox_o3_sirt1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FoxO3_Sirt1`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.species_labels"
},
{
"name": "hox_a11",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.hox_a11"
},
{
"name": "sirt1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.sirt1"
},
{
"name": "fox_o3",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.fox_o3"
},
{
"name": "sirt1_mrna",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.sirt1_mrna"
},
{
"name": "hox_a11_mrna",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.hox_a11_mrna"
},
{
"name": "fox_o3_sirt1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.fox_o3_sirt1"
}
]
},
"tags": [
"generegulation",
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "MODEL1704110001 Proctor2017 Identifying Microrna For Muscle Regeneration During Ageing 5 Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model",
"alias": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model_state"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model_summary"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model_species_labels"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110001_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Proctor2017 - Identifying microRNA for muscleregeneration during ageing (Mir181_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mi. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageproctor2017-identifying-microrna-for-muscle-regeneration-during
Created2026-05-17
Updated2026-05-17
generegulationphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation