Kongas2001 - Creatine Kinase Energy Metabolic Signalling Muscle Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_ims_adenosine_triphosphate",
        "label": "Initial Ims Adenosine Triphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.initial_ims_adenosine_triphosphate",
        "description": "Initial value for Ims Adenosine Triphosphate. Maps to source symbol `ATP_i`. Units: micromolar. Naming evidence: source metadata names `ATP_i` as `IMS adenosine triphosphate`.",
        "accepted_units": [
          "micromolar"
        ]
      },
      {
        "name": "initial_ims_adenosine_diphosphate",
        "label": "Initial Ims Adenosine Diphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.initial_ims_adenosine_diphosphate",
        "description": "Initial value for Ims Adenosine Diphosphate. Maps to source symbol `ADP_i`. Units: micromolar. Naming evidence: source metadata names `ADP_i` as `IMS adenosine diphosphate`.",
        "accepted_units": [
          "micromolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.variable_labels"
      },
      {
        "name": "ims_adenosine_triphosphate",
        "label": "Ims Adenosine Triphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.ims_adenosine_triphosphate",
        "description": "Ims Adenosine Triphosphate. Maps to source symbol `ATP_i`. Units: micromolar. Naming evidence: source metadata names `ATP_i` as `IMS adenosine triphosphate`."
      },
      {
        "name": "ims_adenosine_diphosphate",
        "label": "Ims Adenosine Diphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.ims_adenosine_diphosphate",
        "description": "Ims Adenosine Diphosphate. Maps to source symbol `ADP_i`. Units: micromolar. Naming evidence: source metadata names `ADP_i` as `IMS adenosine diphosphate`."
      },
      {
        "name": "cytosolic_adenosine_triphosphate",
        "label": "Cytosolic Adenosine Triphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.cytosolic_adenosine_triphosphate",
        "description": "Cytosolic Adenosine Triphosphate. Maps to source symbol `ATP`. Units: micromolar. Naming evidence: source metadata names `ATP` as `cytosolic adenosine triphosphate`."
      },
      {
        "name": "cytosolic_adenosine_diphosphate",
        "label": "Cytosolic Adenosine Diphosphate",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.cytosolic_adenosine_diphosphate",
        "description": "Cytosolic Adenosine Diphosphate. Maps to source symbol `ADP`. Units: micromolar. Naming evidence: source metadata names `ADP` as `cytosolic adenosine diphosphate`."
      },
      {
        "name": "kadp",
        "label": "Kadp",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.kadp",
        "description": "Kadp. Maps to source symbol `KADP`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "j_atp",
        "label": "J ATP",
        "maps_to": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.j_atp",
        "description": "J ATP. Maps to source symbol `J_ATP`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Kongas2001 - Creatine Kinase Energy Metabolic Signalling Muscle Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model",
      "parameters": {
        "model_path": "data/kongas_vanbeek_2001.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model_state"
      ],
      "from": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model_summary"
      ],
      "from": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model_trajectory"
      ],
      "from": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model_variable_labels"
      ],
      "from": "physiology_cellml_kongas_vanbeek_2001_kongasvanbeek2001_model.variable_labels"
    }
  ],
  "package": "kongas2001-creatine-kinase-energy-metabolic-signalling-muscle",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Kongas, Vanbeek, 2001. Public controls and outputs are mapped to real source symbols for signalling physiology.",
  "schema_version": "2.0"
}