Koivumaki2009 - Serca Pump Dynamics Regulation Cardiac Myocytes Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_ca_cyt",
        "label": "Initial Ca Cyt",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.initial_ca_cyt",
        "description": "Initial value for Ca Cyt. Maps to source symbol `Ca_cyt`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "uM"
        ]
      },
      {
        "name": "initial_ca_serca",
        "label": "Initial Ca Serca",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.initial_ca_serca",
        "description": "Initial value for Ca Serca. Maps to source symbol `Ca_serca`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "uM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.variable_labels"
      },
      {
        "name": "intracellular_sodium",
        "label": "Intracellular Sodium",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.intracellular_sodium",
        "description": "Intracellular Sodium. Maps to source symbol `Na_i`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current",
        "label": "Sodium Current",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.sodium_current",
        "description": "Sodium Current. Maps to source symbol `INaCa`. Units: uA_per_uF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "membrane_capacitance",
        "label": "Membrane Capacitance",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.membrane_capacitance",
        "description": "Membrane Capacitance. Maps to source symbol `C_m`. Units: uF_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "eta",
        "label": "Eta",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.eta",
        "description": "Eta. Maps to source symbol `eta`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "k_na_ca",
        "label": "K Na Ca",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.k_na_ca",
        "description": "K Na Ca. Maps to source symbol `kNaCa`. Units: uA_per_uF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "km_ca",
        "label": "Km Ca",
        "maps_to": "physiology_cellml_koivumaki_2009_koivumaki2009_model.km_ca",
        "description": "Km Ca. Maps to source symbol `KmCa`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Koivumaki2009 - Serca Pump Dynamics Regulation Cardiac Myocytes Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_koivumaki_2009_koivumaki2009_model",
      "parameters": {
        "model_path": "data/koivumaki_takalo_korhonen_tavi_weckstrom_2009_reduced_myocyte_long.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_koivumaki_2009_koivumaki2009_model_state"
      ],
      "from": "physiology_cellml_koivumaki_2009_koivumaki2009_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_koivumaki_2009_koivumaki2009_model_summary"
      ],
      "from": "physiology_cellml_koivumaki_2009_koivumaki2009_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_koivumaki_2009_koivumaki2009_model_trajectory"
      ],
      "from": "physiology_cellml_koivumaki_2009_koivumaki2009_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_koivumaki_2009_koivumaki2009_model_variable_labels"
      ],
      "from": "physiology_cellml_koivumaki_2009_koivumaki2009_model.variable_labels"
    }
  ],
  "package": "koivumaki2009-serca-pump-dynamics-regulation-cardiac-myocytes",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Koivumaki,2009. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}