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Source-faithful physiology lab for Topp200 - Model of b-Cell Mass, Insulin, and Glucose Kinetics:Pathways to Diabetes. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_glucose_state",
"label": "Initial Glucose State (source G)",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.initial_glucose_state",
"description": "Initial value for Glucose State (source G). Maps to source symbol `G`. Units: native SBML value. Naming evidence: glucose-insulin context supports a glucose-prefixed state."
},
{
"name": "initial_insulin_state",
"label": "Initial Insulin State (source I)",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.initial_insulin_state",
"description": "Initial value for Insulin State (source I). Maps to source symbol `I`. Units: native SBML value. Naming evidence: glucose-insulin context supports an insulin-prefixed state."
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.trajectory"
},
{
"name": "species_labels",
"label": "Observable Labels",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.species_labels"
},
{
"name": "glucose_state",
"label": "Glucose State (source G)",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.glucose_state",
"description": "Glucose State (source G). Maps to source symbol `G`. Units: native SBML value. Naming evidence: glucose-insulin context supports a glucose-prefixed state."
},
{
"name": "insulin_state",
"label": "Insulin State (source I)",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.insulin_state",
"description": "Insulin State (source I). Maps to source symbol `I`. Units: native SBML value. Naming evidence: glucose-insulin context supports an insulin-prefixed state."
},
{
"name": "beta",
"label": "Beta",
"maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.beta",
"description": "Beta. Maps to source symbol `beta`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Biomodels model2001080002 - Topp200 B Cell Mass Insulin Glucose Kinetics Pathways Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model",
"parameters": {
"model_path": "data/MODEL2001080002.xml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_state"
],
"from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.state"
},
{
"to": [
"visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_summary"
],
"from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.summary"
},
{
"to": [
"visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_trajectory"
],
"from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.trajectory"
},
{
"to": [
"visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_species_labels"
],
"from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.species_labels"
}
],
"package": "biomodelsmodel2001080002-topp200-b-cell-mass-insulin-gl-e52dc589",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Topp200 - Model of b-Cell Mass, Insulin, and Glucose Kinetics:Pathways to Diabetes. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagebiomodelsmodel2001080002-topp200-b-cell-mass-insulin-gl-e52dc589
Created2026-05-23
Updated2026-06-13
physiologysbmlbiomodels_ebifaithfulvisualisationother