Sonntag2012 - Mtor Irs Dependent Regulation Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_akt_p_s473",
        "label": "Initial Akt P S473",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.initial_akt_p_s473",
        "description": "Initial value for Akt P S473. Maps to source symbol `Akt_pS473`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "initial_akt_p_s473_obs",
        "label": "Initial Akt P S473 Obs",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.initial_akt_p_s473_obs",
        "description": "Initial value for Akt P S473 Obs. Maps to source symbol `Akt_pS473_obs`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.trajectory"
      },
      {
        "name": "species_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.species_labels"
      },
      {
        "name": "akt_p_s473",
        "label": "Akt P S473",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_p_s473",
        "description": "Akt P S473. Maps to source symbol `Akt_pS473`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_p_s473_obs",
        "label": "Akt P S473 Obs",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_p_s473_obs",
        "description": "Akt P S473 Obs. Maps to source symbol `Akt_pS473_obs`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_p_t308",
        "label": "Akt P T308",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_p_t308",
        "description": "Akt P T308. Maps to source symbol `Akt_pT308`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_p_t308_obs",
        "label": "Akt P T308 Obs",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_p_t308_obs",
        "description": "Akt P T308 Obs. Maps to source symbol `Akt_pT308_obs`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_s473",
        "label": "Akt S473",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_s473",
        "description": "Akt S473. Maps to source symbol `Akt_S473`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_t308",
        "label": "Akt T308",
        "maps_to": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.akt_t308",
        "description": "Akt T308. Maps to source symbol `Akt_T308`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Sonntag2012 - Mtor Irs Dependent Regulation Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model",
      "parameters": {
        "model_path": "data/BIOMD0000000580.xml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model_state"
      ],
      "from": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.state"
    },
    {
      "to": [
        "visualisation.physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model_summary"
      ],
      "from": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model_trajectory"
      ],
      "from": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model_species_labels"
      ],
      "from": "physiology_sbml_sonntag2012_mtor_model_irs_dependent_regulation_biomd0000000580_model.species_labels"
    }
  ],
  "package": "sonntag2012-mtor-irs-dependent-regulation",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Sonntag2012 - mTOR model - IRS dependent regulation of AMPK by insulin. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
  "schema_version": "2.0"
}