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Mathematical description of the interactions of CycE/Cdk2, Cdc25A, and P27Kip1 in a core cancer subnetwork. Model is encoded by Matthieu Maire/partially by Krishna Kumar Tiwari and submitted to BioMod.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cyce_cdk2",
"label": "CycE/CDK2",
"units": "native SBML value",
"default": 1,
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_cyce_cdk2",
"description": "Initial CycE/CDK2. Sets the initial value of bundled SBML symbol `CycE_CDK2`."
},
{
"name": "initial_cdc25a",
"label": "Cdc25A",
"units": "native SBML value",
"default": 1,
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_cdc25a",
"description": "Initial Cdc25A. Sets the initial value of bundled SBML symbol `Cdc25A`."
},
{
"name": "initial_p27_kip1",
"label": "p27 Kip1",
"units": "native SBML value",
"default": 1,
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_p27_kip1",
"description": "Initial p27 Kip1. Sets the initial value of bundled SBML symbol `p27_kip1`."
}
],
"outputs": [
{
"name": "cyc_e_cdk2",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.cyc_e_cdk2",
"description": "CycE CDK2 observable. Maps to SBML symbol `CycE_CDK2`."
},
{
"name": "p27_kip1",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.p27_kip1",
"description": "P27 kip1 observable. Maps to SBML symbol `p27_kip1`."
},
{
"name": "cdc25a",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.cdc25a",
"description": "Cdc25A observable. Maps to SBML symbol `Cdc25A`."
},
{
"name": "state",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.state",
"description": "Full raw SBML observable record for reproducibility and downstream visualisation."
},
{
"name": "summary",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.summary",
"description": "Change and peak summary across the simulated SBML observables."
},
{
"name": "species_labels",
"maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.species_labels",
"description": "Mapping from selected raw SBML observable symbols to display labels."
}
]
},
"tags": [
"biomodels_ebi",
"cellcycle",
"curated",
"faithful",
"oncology",
"physiology",
"sbml",
"systemsbiology",
"tumor-growth"
],
"title": "Bayleyegn2016 - interactions of CycE/Cdk2, Cdc25A, and P27 Kip1 in a core cancer subnetwork Lab",
"models": [
{
"path": "models/core",
"alias": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_state"
],
"from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.state"
},
{
"to": [
"visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_summary"
],
"from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.summary"
},
{
"to": [
"visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_species_labels"
],
"from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.species_labels"
}
],
"package": "bayleyegn2016-interactions-of-cyce-cdk2-cdc25a-and-p27-ad0e4cbc",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Mathematical description of the interactions of CycE/Cdk2, Cdc25A, and P27Kip1 in a core cancer subnetwork. Model is encoded by Matthieu Maire/partially by Krishna Kumar Tiwari and submitted to BioMod.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagebayleyegn2016-interactions-of-cyce-cdk2-cdc25a-and-p27-ad0e4cbc
Created2026-05-16
Updated2026-06-13
biomodels_ebicellcyclecuratedfaithfuloncologyphysiologysbmlsystemsbiologytumor-growthvisualisationother