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Source-faithful physiology lab for Maltsev 2009. Public controls and outputs are mapped to real source symbols for electrophysiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_membrane_voltage",
"label": "Initial Membrane Voltage",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.initial_membrane_voltage",
"description": "Initial value for Membrane Voltage. Maps to source symbol `Vm`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"millivolt"
]
},
{
"name": "initial_ca_jsr",
"label": "Initial Ca Jsr",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.initial_ca_jsr",
"description": "Initial value for Ca Jsr. Maps to source symbol `Ca_jsr`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"millimolar"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.variable_labels"
},
{
"name": "membrane_voltage",
"label": "Membrane Voltage",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.membrane_voltage",
"description": "Membrane Voltage. Maps to source symbol `Vm`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_jsr",
"label": "Ca Jsr",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.ca_jsr",
"description": "Ca Jsr. Maps to source symbol `Ca_jsr`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_nsr",
"label": "Ca Nsr",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.ca_nsr",
"description": "Ca Nsr. Maps to source symbol `Ca_nsr`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_sub",
"label": "Ca Sub",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.ca_sub",
"description": "Ca Sub. Maps to source symbol `Ca_sub`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "model_state_f_cq",
"label": "Model State F Cq (source fCQ)",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.model_state_f_cq",
"description": "Model State F Cq (source fCQ). Maps to source symbol `fCQ`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
},
{
"name": "model_state_f_tc",
"label": "Model State F Tc (source fTC)",
"maps_to": "physiology_cellml_maltsev_2009_maltsev2009_model.model_state_f_tc",
"description": "Model State F Tc (source fTC). Maps to source symbol `fTC`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
}
]
},
"title": "Maltsev2009 - Synergism Coupled Subsarcolemmal Clocks Sarcolemmal Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_maltsev_2009_maltsev2009_model",
"parameters": {
"model_path": "data/maltsev_2009_paper.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_maltsev_2009_maltsev2009_model_state"
],
"from": "physiology_cellml_maltsev_2009_maltsev2009_model.state"
},
{
"to": [
"visualisation.physiology_cellml_maltsev_2009_maltsev2009_model_summary"
],
"from": "physiology_cellml_maltsev_2009_maltsev2009_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_maltsev_2009_maltsev2009_model_trajectory"
],
"from": "physiology_cellml_maltsev_2009_maltsev2009_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_maltsev_2009_maltsev2009_model_variable_labels"
],
"from": "physiology_cellml_maltsev_2009_maltsev2009_model.variable_labels"
}
],
"package": "maltsev2009-synergism-coupled-subsarcolemmal-clocks-sarcolemmal",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.1",
"description": "Source-faithful physiology lab for Maltsev 2009. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagemaltsev2009-synergism-coupled-subsarcolemmal-clocks-sarcolemmal
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother