About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cdk1cyc_b",
"label": "Initial Cdk1cyc B",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.initial_cdk1cyc_b",
"description": "Initial level of Cdk1cyc B. Maps to SBML symbol `Cdk1CycB`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "cdk1cyc_b",
"label": "Cdk1cyc B",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.cdk1cyc_b",
"description": "Cdk1cyc B. Maps to SBML symbol `Cdk1CycB` and is emitted in native SBML units."
},
{
"name": "source_defined_apc_state",
"label": "source-defined APC state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.source_defined_apc_state",
"description": "source-defined APC state. Maps to SBML symbol `APC` and is emitted in native SBML units."
},
{
"name": "source_defined_cycb_state",
"label": "source-defined CYCB state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.source_defined_cycb_state",
"description": "source-defined CYCB state. Maps to SBML symbol `CycB` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"cell-cycle-signaling"
],
"title": "Araujo2016 - Positive feedback in Cdk1 signalling keeps mitotic duration short and constant Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_state"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.state"
},
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_summary"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_species_labels"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.species_labels"
}
],
"package": "araujo2016-positive-feedback-in-cdk1-signalling",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagearaujo2016-positive-feedback-in-cdk1-signalling
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicell-cycle-signalingvisualisationother