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Its a Deterministic ODE model showcasing mechanism of PDL1 induced TCR and CD38 signalling inhibition. The model also contains the LCK activation and inactivation phenomenon dependent on the particula.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_lcki",
"label": "Initial Lcki",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lcki",
"description": "Initial Lcki. Sets the initial value of bundled SBML species `LCKi`."
},
{
"name": "initial_lckyi",
"label": "Initial Lckyi",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckyi",
"description": "Initial Lckyi. Sets the initial value of bundled SBML species `LCKyi`."
},
{
"name": "initial_lckya",
"label": "Initial Lckya",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckya",
"description": "Initial Lckya. Sets the initial value of bundled SBML species `LCKya`."
},
{
"name": "initial_lckyiya",
"label": "Initial Lckyiya",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckyiya",
"description": "Initial Lckyiya. Sets the initial value of bundled SBML species `LCKyiya`."
},
{
"name": "initial_lckpi",
"label": "Initial Lckpi",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckpi",
"description": "Initial Lckpi. Sets the initial value of bundled SBML species `LCKpi`."
}
],
"outputs": [
{
"name": "lcki",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lcki"
},
{
"name": "lckyi",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckyi"
},
{
"name": "lckya",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckya"
},
{
"name": "lckyiya",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckyiya"
},
{
"name": "lckpi",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckpi"
},
{
"name": "state",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.species_labels"
}
]
},
"title": "Theinmozhi2018 - Mechanism of PD1 inhibiting TCR signaling in Tumor immune regulation Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_state"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.state"
},
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_summary"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_species_labels"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.species_labels"
}
],
"package": "theinmozhi2018-mechanism-of-pd1-inhibiting-tcr-signaling-in",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Its a Deterministic ODE model showcasing mechanism of PDL1 induced TCR and CD38 signalling inhibition. The model also contains the LCK activation and inactivation phenomenon dependent on the particula.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagetheinmozhi2018-mechanism-of-pd1-inhibiting-tcr-signaling-in
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother