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Clean Biosimulant lab for JAK/STAT cytokine signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_abstract_source_state_k115_level",
"label": "Abstract source state K115",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.initial_abstract_source_state_k115_level",
"description": "Abstract source state K115 source parameter. Maps to SBML symbol `mw1df2caba_8e41_4fe5_a1b5_7777eb98ed1c` and preserves the bundled default."
},
{
"name": "initial_abstract_source_state_k121_level",
"label": "Abstract source state K121",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.initial_abstract_source_state_k121_level",
"description": "Abstract source state K121 source parameter. Maps to SBML symbol `mw7aba6db3_c7ec_4192_bb5e_0ac4b466c1a5` and preserves the bundled default."
},
{
"name": "initial_abstract_source_state_k46_level",
"label": "Abstract source state K46",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.initial_abstract_source_state_k46_level",
"description": "Abstract source state K46 source parameter. Maps to SBML symbol `mwe1743f7b_ca2c_47d4_91d7_aed2748d98c5` and preserves the bundled default."
}
],
"outputs": [
{
"name": "egf_egfr",
"label": "EGF EGFR",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.egf_egfr",
"description": "EGF EGFR. Maps to SBML symbol `mw7eacabf9_d68c_491a_aba2_ec0809a8ecc8` and is emitted in native SBML units."
},
{
"name": "shc_adapter_protein",
"label": "Shc adapter protein",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.shc_adapter_protein",
"description": "Shc adapter protein. Maps to SBML symbol `mw3c2e1b43_29ca_491a_93e9_c723a993d6fb` and is emitted in native SBML units."
},
{
"name": "sos_guanine_nucleotide_exchange_factor",
"label": "SOS guanine-nucleotide exchange factor",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.sos_guanine_nucleotide_exchange_factor",
"description": "SOS guanine-nucleotide exchange factor. Maps to SBML symbol `mw9dcaa655_a755_426e_a3fa_1ad7c3c45575` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"mapk",
"egfr",
"ras-erk",
"pi3k-akt",
"jak-stat",
"oncology"
],
"title": "Bidkhori2012 - EGFR signalling in NSCLC Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model_state"
],
"from": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.state"
},
{
"to": [
"visualisation.signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model_summary"
],
"from": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model_species_labels"
],
"from": "signaling_sbml_bidkhori2012_egfr_signalling_in_nsclc_biomd0000000453_model.species_labels"
}
],
"package": "bidkhori2012-egfr-signalling-in-nsclc",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for JAK/STAT cytokine signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebidkhori2012-egfr-signalling-in-nsclc
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimapkegfrras-erkpi3k-aktjak-statoncologyvisualisationother