Day2015 - Early cellular innate and adaptive immune responses to ischemia/reperfusion injury and solid organ allotransplantation Lab
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This is an ordinary differential equation model of the early inflammatory response during transplantion. Descriptions are included of the inflammatory events associated with the initial surgical proce.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_unresolved_immune_observable_1",
"label": "Initial Unresolved Immune Observable 1",
"units": "native source value",
"default": 4,
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.initial_unresolved_immune_observable_1",
"description": "Initial Unresolved Immune Observable 1. Sets the initial value of bundled SBML species `D`."
},
{
"name": "initial_unresolved_immune_observable_2",
"label": "Initial Unresolved Immune Observable 2",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.initial_unresolved_immune_observable_2",
"description": "Initial Unresolved Immune Observable 2. Sets the initial value of bundled SBML species `DG`."
},
{
"name": "initial_unresolved_immune_observable_3",
"label": "Initial Unresolved Immune Observable 3",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.initial_unresolved_immune_observable_3",
"description": "Initial Unresolved Immune Observable 3. Sets the initial value of bundled SBML species `I`."
},
{
"name": "initial_unresolved_immune_observable_4",
"label": "Initial Unresolved Immune Observable 4",
"units": "native source value",
"default": 0.125,
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.initial_unresolved_immune_observable_4",
"description": "Initial Unresolved Immune Observable 4. Sets the initial value of bundled SBML species `A`."
},
{
"name": "initial_unresolved_immune_observable_5",
"label": "Initial Unresolved Immune Observable 5",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.initial_unresolved_immune_observable_5",
"description": "Initial Unresolved Immune Observable 5. Sets the initial value of bundled SBML species `TP`."
}
],
"outputs": [
{
"name": "unresolved_immune_observable_1",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.unresolved_immune_observable_1"
},
{
"name": "unresolved_immune_observable_2",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.unresolved_immune_observable_2"
},
{
"name": "unresolved_immune_observable_3",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.unresolved_immune_observable_3"
},
{
"name": "unresolved_immune_observable_4",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.unresolved_immune_observable_4"
},
{
"name": "unresolved_immune_observable_5",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.unresolved_immune_observable_5"
},
{
"name": "state",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.species_labels"
}
]
},
"title": "Day2015 - Early cellular innate and adaptive immune responses to ischemia/reperfusion injury and solid organ allotransplantation Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model_state"
],
"from": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.state"
},
{
"to": [
"visualisation.immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model_summary"
],
"from": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model_species_labels"
],
"from": "immunology_sbml_day2015_early_cellular_innate_and_adaptive_immun_model1911190001_model.species_labels"
}
],
"package": "day2015-early-cellular-innate-and-adaptive-immune-responses",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.1",
"description": "This is an ordinary differential equation model of the early inflammatory response during transplantion. Descriptions are included of the inflammatory events associated with the initial surgical proce.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packageday2015-early-cellular-innate-and-adaptive-immune-responses
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother