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Wodarz2007 - HIV/CD4 T-cell interaction A deterministic model illustrating howCD4 T-cells can influence HIV infection. This model is described in the article: Infection dynamics in HIV-specific CD4 T.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_t_cell_infected",
"label": "Initial T Cell Infected",
"units": "native source value",
"default": 0.1,
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_t_cell_infected",
"description": "Initial T Cell Infected. Sets the initial value of bundled SBML species `x`."
},
{
"name": "initial_t_cell_uninfected",
"label": "Initial T Cell Uninfected",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_t_cell_uninfected",
"description": "Initial T Cell Uninfected. Sets the initial value of bundled SBML species `y`."
},
{
"name": "initial_free_virus",
"label": "Initial Free Virus",
"units": "native source value",
"default": 1,
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_free_virus",
"description": "Initial Free Virus. Sets the initial value of bundled SBML species `v`."
},
{
"name": "uninfected_t_cell_death_rate",
"label": "Uninfected T Cell Death Rate",
"units": "native source value",
"default": 0.1,
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.uninfected_t_cell_death_rate",
"description": "Uninfected T Cell Death Rate. Sets bundled SBML parameter `d`."
}
],
"outputs": [
{
"name": "t_cell_infected",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.t_cell_infected"
},
{
"name": "t_cell_uninfected",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.t_cell_uninfected"
},
{
"name": "free_virus",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.free_virus"
},
{
"name": "state",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.species_labels"
}
]
},
"title": "Wodarz2007 - HIV/CD4 T-cell interaction Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_state"
],
"from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.state"
},
{
"to": [
"visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_summary"
],
"from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_species_labels"
],
"from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.species_labels"
}
],
"package": "wodarz2007-hiv-cd4-t-cell-interaction",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Wodarz2007 - HIV/CD4 T-cell interaction A deterministic model illustrating howCD4 T-cells can influence HIV infection. This model is described in the article: Infection dynamics in HIV-specific CD4 T.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagewodarz2007-hiv-cd4-t-cell-interaction
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother