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Source-faithful physiology lab for Nagano and Gerritsen, 2001. Public controls and outputs are mapped to real source symbols for source-model physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_l_ce",
"label": "Initial Model State L Ce (source L_ce)",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.initial_model_state_l_ce",
"description": "Initial value for Model State L Ce (source L_ce). Maps to source symbol `L_ce`. Units: metre. Naming evidence: source symbol is too ambiguous for a stronger public label.",
"accepted_units": [
"metre"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.variable_labels"
},
{
"name": "model_state_l_ce",
"label": "Model State L Ce (source L_ce)",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.model_state_l_ce",
"description": "Model State L Ce (source L_ce). Maps to source symbol `L_ce`. Units: metre. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "alpha",
"label": "Alpha",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.alpha",
"description": "Alpha. Maps to source symbol `alpha`. Units: newton_per_metre. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "contraction_c",
"label": "Contraction C",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.contraction_c",
"description": "Contraction C. Maps to source symbol `c`. Units: newton. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "contraction_c1",
"label": "Contraction C1",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.contraction_c1",
"description": "Contraction C1. Maps to source symbol `c1`. Units: per_second. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "contraction_c2",
"label": "Contraction C2",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.contraction_c2",
"description": "Contraction C2. Maps to source symbol `c2`. Units: newton. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "contraction_c3",
"label": "Contraction C3",
"maps_to": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.contraction_c3",
"description": "Contraction C3. Maps to source symbol `c3`. Units: per_newton_second. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Nagano2001 - Effects Neuromuscular Strength Training Vertical Jumping Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model",
"parameters": {
"model_path": "data/nagano_2001.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model_state"
],
"from": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.state"
},
{
"to": [
"visualisation.physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model_summary"
],
"from": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model_trajectory"
],
"from": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model_variable_labels"
],
"from": "physiology_cellml_nagano_and_gerritsen_2001_naganogerritsen2001_model.variable_labels"
}
],
"package": "nagano2001-effects-neuromuscular-strength-training-vert-d9a9374b",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Nagano and Gerritsen, 2001. Public controls and outputs are mapped to real source symbols for source-model physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagenagano2001-effects-neuromuscular-strength-training-vert-d9a9374b
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother