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This a model from the article: Excitation-contraction coupling and extracellular calcium transients in rabbitatrium: reconstruction of basic cellular mechanisms. It can be used to explore systemsbiology hilgemann1987 calciumtransients model0848444339 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_v_membrane",
"label": "Initial V Membrane",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_v_membrane",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `V_membrane`."
},
{
"name": "initial_prod_frac",
"label": "Initial Prod Frac",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_prod_frac",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ProdFrac`."
},
{
"name": "initial_na_i",
"label": "Initial Na I",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_na_i",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Na_i`."
},
{
"name": "initial_model_state_k_i",
"label": "Initial Model State K I",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_model_state_k_i",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `K_i`."
},
{
"name": "initial_f_ca",
"label": "Initial F Ca",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_f_ca",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `f_Ca`."
},
{
"name": "initial_ca_up",
"label": "Initial Ca Up",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_ca_up",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Ca_up`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.species_labels"
},
{
"name": "v_membrane",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.v_membrane"
},
{
"name": "prod_frac",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.prod_frac"
},
{
"name": "na_i",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.na_i"
},
{
"name": "k_i",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.k_i"
},
{
"name": "f_ca",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.f_ca"
},
{
"name": "ca_up",
"maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.ca_up"
}
]
},
"tags": [
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Hilgemann1987 Calciumtransients Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_state"
],
"from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_summary"
],
"from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_species_labels"
],
"from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.species_labels"
}
],
"package": "hilgemann1987-calciumtransients",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This a model from the article: Excitation-contraction coupling and extracellular calcium transients in rabbitatrium: reconstruction of basic cellular mechanisms. It can be used to explore systemsbiology hilgemann1987 calciumtransients model0848444339 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagehilgemann1987-calciumtransients
Created2026-05-17
Updated2026-06-13
physiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother