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This model is described in the article: The mechanism of catalase action. It can be used to explore systemsbiology chance1952 catalase mechanism BioModels0000000282 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_product_2",
"label": "Initial Product 2",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_product_2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p2`."
},
{
"name": "initial_product_1",
"label": "Initial Product 1",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_product_1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p1`."
},
{
"name": "initial_substrate_s_hydrogen_peroxide",
"label": "Initial Substrate S Hydrogen Peroxide",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_substrate_s_hydrogen_peroxide",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x`."
},
{
"name": "initial_enzyme_e_catalase",
"label": "Initial Enzyme E Catalase",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_enzyme_e_catalase",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `e`."
},
{
"name": "initial_enzyme_substrate_complex_es_catalase_hydrogen_peroxide",
"label": "Initial Enzyme Substrate Complex Es Catalase Hydrogen Peroxide",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_enzyme_substrate_complex_es_catalase_hydrogen_peroxide",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p`."
},
{
"name": "initial_donor_ah2",
"label": "Initial Donor AH2",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.initial_donor_ah2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `a`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.species_labels"
},
{
"name": "product_2",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.product_2"
},
{
"name": "product_1",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.product_1"
},
{
"name": "substrate_s_hydrogen_peroxide",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.substrate_s_hydrogen_peroxide"
},
{
"name": "enzyme_e_catalase",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.enzyme_e_catalase"
},
{
"name": "enzyme_substrate_complex_es_catalase_hydrogen_peroxide",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.enzyme_substrate_complex_es_catalase_hydrogen_peroxide"
},
{
"name": "donor_ah2",
"maps_to": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.donor_ah2"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Chance1952 Catalase Mechanism Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model_state"
],
"from": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model_summary"
],
"from": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model_species_labels"
],
"from": "systemsbiology_sbml_chance1952_catalase_mechanism_biomd0000000282_model.species_labels"
}
],
"package": "chance1952-catalase-mechanism",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model is described in the article: The mechanism of catalase action. It can be used to explore systemsbiology chance1952 catalase mechanism BioModels0000000282 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagechance1952-catalase-mechanism
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother