Olsen2003_neutrophil_oscillatory_metabolism Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_h2o2",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.initial_h2o2",
        "description": "Initial condition for h2o2. Maps to bundled SBML symbol `H2O2_p`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_ferric_peroxidase",
        "units": "native SBML value",
        "default": 300,
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.initial_ferric_peroxidase",
        "description": "Initial condition for ferric peroxidase. Maps to bundled SBML symbol `per3_p`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_compound_i",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.initial_compound_i",
        "description": "Initial condition for compound i. Maps to bundled SBML symbol `coI_p`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_melatonin",
        "units": "native SBML value",
        "default": 300,
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.initial_melatonin",
        "description": "Initial condition for melatonin. Maps to bundled SBML symbol `MLTH_p`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_compound_ii",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.initial_compound_ii",
        "description": "Initial condition for compound ii. Maps to bundled SBML symbol `coII_p`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      }
    ],
    "outputs": [
      {
        "name": "h2o2",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.h2o2"
      },
      {
        "name": "ferric_peroxidase",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.ferric_peroxidase"
      },
      {
        "name": "compound_i",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.compound_i"
      },
      {
        "name": "melatonin",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.melatonin"
      },
      {
        "name": "compound_ii",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.compound_ii"
      },
      {
        "name": "observable_values",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.observable_values"
      },
      {
        "name": "run_summary",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.run_summary"
      },
      {
        "name": "observable_labels",
        "maps_to": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.observable_labels"
      }
    ]
  },
  "title": "Olsen2003_neutrophil_oscillatory_metabolism Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model",
      "parameters": {
        "model_path": "data/BIOMD0000000143.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model_observable_values"
      ],
      "from": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.observable_values"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model_run_summary"
      ],
      "from": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.run_summary"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model_observable_labels"
      ],
      "from": "metabolism_sbml_olsen2003_neutrophil_oscillatory_metabolism_biomd0000000143_model.observable_labels"
    }
  ],
  "package": "olsen2003-neutrophil-oscillatory-metabolism",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "Olsen2003_neutrophil_oscillatory_metabolism This model is described in the article: A model of the oscillatory metabolism of activated neutrophils. Olsen LF, Kummer U, Kindzelskii AL, Petty HR.",
  "schema_version": "2.0"
}