Soboleva2005 - Soboleva Vetharaniam Nixon Montenegro Pearson Sn Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_concentration_b1",
        "label": "Initial Concentration B1 (source B1)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.initial_concentration_b1",
        "description": "Initial value for Concentration B1 (source B1). Maps to source symbol `B1`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state.",
        "accepted_units": [
          "nanomolar"
        ]
      },
      {
        "name": "initial_concentration_b2",
        "label": "Initial Concentration B2 (source B2)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.initial_concentration_b2",
        "description": "Initial value for Concentration B2 (source B2). Maps to source symbol `B2`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state.",
        "accepted_units": [
          "nanomolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.variable_labels"
      },
      {
        "name": "concentration_b1",
        "label": "Concentration B1 (source B1)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.concentration_b1",
        "description": "Concentration B1 (source B1). Maps to source symbol `B1`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_b2",
        "label": "Concentration B2 (source B2)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.concentration_b2",
        "description": "Concentration B2 (source B2). Maps to source symbol `B2`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_r",
        "label": "Concentration R (source R)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.concentration_r",
        "description": "Concentration R (source R). Maps to source symbol `R`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_u",
        "label": "Concentration U (source U)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.concentration_u",
        "description": "Concentration U (source U). Maps to source symbol `U`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "model_state_x",
        "label": "Model State X (source x)",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.model_state_x",
        "description": "Model State X (source x). Maps to source symbol `x`. Units: flux. Naming evidence: source symbol is too ambiguous for a stronger public label."
      },
      {
        "name": "alpha0",
        "label": "Alpha0",
        "maps_to": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.alpha0",
        "description": "Alpha0. Maps to source symbol `alpha0`. Units: per_nanomolar_day. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Soboleva2005 - Soboleva Vetharaniam Nixon Montenegro Pearson Sn Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model",
      "parameters": {
        "model_path": "data/soboleva_vetharaniam_nixon_montenegro_pearson_sneyd_2005_a.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model_state"
      ],
      "from": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model_summary"
      ],
      "from": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model_trajectory"
      ],
      "from": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model_variable_labels"
      ],
      "from": "physiology_cellml_soboleva_vetharaniam_nixon_montenegro_pearson_sn_sobolevavetharaniamnixonmontenegropearsonsneyd2005_model.variable_labels"
    }
  ],
  "package": "soboleva2005-soboleva-vetharaniam-nixon-montenegro-pearson-sn",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Soboleva, Vetharaniam, Nixon, Montenegro, Pearson, Sneyd, 2005. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}