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This model was taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsu. It can be used to explore systemsbiology abu soud1999 l arginine model9087766308 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_l_minus_arginine",
"label": "Initial L Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.initial_l_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `L_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos",
"label": "Initial Im Minus Nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.initial_im_minus_nnos",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS`."
},
{
"name": "initial_imidazole",
"label": "Initial Imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.initial_imidazole",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Imidazole`."
},
{
"name": "initial_nnos_minus_l_minus_arginine",
"label": "Initial Nnos Minus L Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.initial_nnos_minus_l_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nNOS_minus_L_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos_minus_l_minus_arginine",
"label": "Initial Im Minus Nnos Minus L Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.initial_im_minus_nnos_minus_l_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS_minus_L_minus_Arginine`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.species_labels"
},
{
"name": "l_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.l_minus_arginine"
},
{
"name": "im_minus_nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.im_minus_nnos"
},
{
"name": "imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.imidazole"
},
{
"name": "nnos_minus_l_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.nnos_minus_l_minus_arginine"
},
{
"name": "im_minus_nnos_minus_l_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.im_minus_nnos_minus_l_minus_arginine"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Abu Soud1999 L Arginine Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model_state"
],
"from": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model_summary"
],
"from": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model_species_labels"
],
"from": "systemsbiology_sbml_abu_soud1999_l_arginine_model9087766308_model.species_labels"
}
],
"package": "abu-soud1999-l-arginine",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model was taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsu. It can be used to explore systemsbiology abu soud1999 l arginine model9087766308 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageabu-soud1999-l-arginine
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother