Millard2016 - E. coli central carbon and energy metabolism Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_glycolysis_state_1",
        "units": "native SBML value",
        "default": 0.154743005197164,
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.initial_glycolysis_state_1",
        "description": "Initial condition for glycolysis state 1. Maps to bundled SBML symbol `ACCOA`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_glycolysis_state_2",
        "units": "native SBML value",
        "default": 0.0321498018175313,
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.initial_glycolysis_state_2",
        "description": "Initial condition for glycolysis state 2. Maps to bundled SBML symbol `ACO`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_glycolysis_state_3",
        "units": "native SBML value",
        "default": 0.0143909273594558,
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.initial_glycolysis_state_3",
        "description": "Initial condition for glycolysis state 3. Maps to bundled SBML symbol `ACP`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_glycolysis_state_4",
        "units": "native SBML value",
        "default": 0.59787032384441,
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.initial_glycolysis_state_4",
        "description": "Initial condition for glycolysis state 4. Maps to bundled SBML symbol `AKG`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_glycolysis_state_5",
        "units": "native SBML value",
        "default": 0.0654105657862152,
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.initial_glycolysis_state_5",
        "description": "Initial condition for glycolysis state 5. Maps to bundled SBML symbol `BPG`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      }
    ],
    "outputs": [
      {
        "name": "glycolysis_state_1",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.glycolysis_state_1"
      },
      {
        "name": "glycolysis_state_2",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.glycolysis_state_2"
      },
      {
        "name": "glycolysis_state_3",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.glycolysis_state_3"
      },
      {
        "name": "glycolysis_state_4",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.glycolysis_state_4"
      },
      {
        "name": "glycolysis_state_5",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.glycolysis_state_5"
      },
      {
        "name": "observable_values",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.observable_values"
      },
      {
        "name": "run_summary",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.run_summary"
      },
      {
        "name": "observable_labels",
        "maps_to": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.observable_labels"
      }
    ]
  },
  "title": "Millard2016 - E. coli central carbon and energy metabolism Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model",
      "parameters": {
        "model_path": "data/MODEL1505110000.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model_observable_values"
      ],
      "from": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.observable_values"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model_run_summary"
      ],
      "from": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.run_summary"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model_observable_labels"
      ],
      "from": "metabolism_sbml_millard2016_e_coli_central_carbon_and_energy_met_model1505110000_model.observable_labels"
    }
  ],
  "package": "millard2016-e-coli-central-carbon-and-energy-metabolism",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "Millard2016 - E. coli central carbon andenergy metabolism This model is described in the article: Metabolic regulation is sufficient for global and robust coordination of glucose uptake, catabolism, e.",
  "schema_version": "2.0"
}