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Mathematical model of blood coagulation factors II, VII, IX and X as well as protein C and protein S and the effect of warfarin on kinetic rates. It can be used to explore systemsbiology burghaus2014 simulating blood coagulation factor dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_s_warfarin",
"label": "Initial S Warfarin",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_s_warfarin",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `S_warfarin`."
},
{
"name": "initial_r_warfarin",
"label": "Initial R Warfarin",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_r_warfarin",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `R_warfarin`."
},
{
"name": "initial_f_ii",
"label": "Initial F Ii",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_f_ii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `fII`."
},
{
"name": "initial_model_state_f_x",
"label": "Initial Model State F X",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_model_state_f_x",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `fX`."
},
{
"name": "initial_protein_s",
"label": "Initial Protein S",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_protein_s",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Protein_S`."
},
{
"name": "initial_f_ix",
"label": "Initial F Ix",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.initial_f_ix",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `fIX`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.species_labels"
},
{
"name": "s_warfarin",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.s_warfarin"
},
{
"name": "r_warfarin",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.r_warfarin"
},
{
"name": "f_ii",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.f_ii"
},
{
"name": "f_x",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.f_x"
},
{
"name": "protein_s",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.protein_s"
},
{
"name": "f_ix",
"maps_to": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.f_ix"
}
]
},
"tags": [
"pharmacology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Burghaus2014 Simulating Blood Coagulation Factor Xa Inhibitors Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model_state"
],
"from": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model_summary"
],
"from": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model_species_labels"
],
"from": "systemsbiology_sbml_burghaus2014_simulating_blood_coagulation_factor_model1807180005_model.species_labels"
}
],
"package": "burghaus2014-simulating-blood-coagulation-factor-xa-inhibitors",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Mathematical model of blood coagulation factors II, VII, IX and X as well as protein C and protein S and the effect of warfarin on kinetic rates. It can be used to explore systemsbiology burghaus2014 simulating blood coagulation factor dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageburghaus2014-simulating-blood-coagulation-factor-xa-inhibitors
Created2026-05-17
Updated2026-06-13
pharmacologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother