Lemaire2004 - Mathematical Interactions Between Osteoblast Osteoclast Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_active_osteoblasts",
        "label": "Initial Active Osteoblasts",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.initial_active_osteoblasts",
        "description": "Initial value for Active Osteoblasts. Maps to source symbol `B`. Units: picomolar. Naming evidence: source metadata names `B` as `active osteoblasts`.",
        "accepted_units": [
          "picomolar"
        ]
      },
      {
        "name": "initial_active_osteoclasts",
        "label": "Initial Active Osteoclasts",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.initial_active_osteoclasts",
        "description": "Initial value for Active Osteoclasts. Maps to source symbol `C`. Units: picomolar. Naming evidence: source metadata names `C` as `active osteoclasts`.",
        "accepted_units": [
          "picomolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.variable_labels"
      },
      {
        "name": "active_osteoblasts",
        "label": "Active Osteoblasts",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.active_osteoblasts",
        "description": "Active Osteoblasts. Maps to source symbol `B`. Units: picomolar. Naming evidence: source metadata names `B` as `active osteoblasts`."
      },
      {
        "name": "active_osteoclasts",
        "label": "Active Osteoclasts",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.active_osteoclasts",
        "description": "Active Osteoclasts. Maps to source symbol `C`. Units: picomolar. Naming evidence: source metadata names `C` as `active osteoclasts`."
      },
      {
        "name": "responding_osteoblasts",
        "label": "Responding Osteoblasts",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.responding_osteoblasts",
        "description": "Responding Osteoblasts. Maps to source symbol `R`. Units: picomolar. Naming evidence: source metadata names `R` as `responding osteoblasts`."
      },
      {
        "name": "c_s_concentration",
        "label": "C S Concentration",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.c_s_concentration",
        "description": "C S Concentration. Maps to source symbol `C_s`. Units: picomolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "concentration_p_0",
        "label": "Concentration P 0 (source P_0)",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.concentration_p_0",
        "description": "Concentration P 0 (source P_0). Maps to source symbol `P_0`. Units: picomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_p_s",
        "label": "Concentration P S (source P_s)",
        "maps_to": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.concentration_p_s",
        "description": "Concentration P S (source P_s). Maps to source symbol `P_s`. Units: picomolar. Naming evidence: amount concentration units identify a concentration state."
      }
    ]
  },
  "title": "Lemaire2004 - Mathematical Interactions Between Osteoblast Osteoclast Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model",
      "parameters": {
        "model_path": "data/lemaire_tobin_greller_cho_suva_2004.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model_state"
      ],
      "from": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model_summary"
      ],
      "from": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model_trajectory"
      ],
      "from": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model_variable_labels"
      ],
      "from": "physiology_cellml_lemaire_tobin_greller_cho_suva_2004_lemairetobingrellerchosuva2004_model.variable_labels"
    }
  ],
  "package": "lemaire2004-mathematical-interactions-between-osteoblas-ffb04524",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Lemaire, Tobin, Greller, Cho, Suva, 2004. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.",
  "schema_version": "2.0"
}