About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
SBML level 2 code originaly generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. It can be used to explore systemsbiology bhartiya2003 tryptophan operon BioModels0000000062 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_exog_trp",
"label": "Initial Exog Trp",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.initial_exog_trp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `To`."
},
{
"name": "initial_total_tryptophan",
"label": "Initial Total Tryptophan",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.initial_total_tryptophan",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Tt`."
},
{
"name": "initial_synthesized_tryptophan",
"label": "Initial Synthesized Tryptophan",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.initial_synthesized_tryptophan",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Ts`."
},
{
"name": "initial_anthranilate_synthase",
"label": "Initial Anthranilate Synthase",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.initial_anthranilate_synthase",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Enz`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.species_labels"
},
{
"name": "exog_trp",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.exog_trp"
},
{
"name": "total_tryptophan",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.total_tryptophan"
},
{
"name": "synthesized_tryptophan",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.synthesized_tryptophan"
},
{
"name": "anthranilate_synthase",
"maps_to": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.anthranilate_synthase"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Bhartiya2003 Tryptophan Operon Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model_state"
],
"from": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model_summary"
],
"from": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model_species_labels"
],
"from": "systemsbiology_sbml_bhartiya2003_tryptophan_operon_biomd0000000062_model.species_labels"
}
],
"package": "bhartiya2003-tryptophan-operon",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "SBML level 2 code originaly generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. It can be used to explore systemsbiology bhartiya2003 tryptophan operon BioModels0000000062 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebhartiya2003-tryptophan-operon
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother