About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
The model reproduces the plots in Figures 1 and 2. Note that the units of the time scale 'A' are not right in the paper, it was corrected by the curator.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_s2",
"label": "Initial Model State S2",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_model_state_s2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `S2`."
},
{
"name": "initial_s2_a",
"label": "Initial S2 A",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_s2_a",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `S2a`."
},
{
"name": "initial_orai1",
"label": "Initial Orai1",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_orai1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Orai1`."
},
{
"name": "initial_model_state_s4",
"label": "Initial Model State S4",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_model_state_s4",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `S4`."
},
{
"name": "initial_model_state_oc",
"label": "Initial Model State Oc",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_model_state_oc",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Oc`."
},
{
"name": "initial_model_state_o_o",
"label": "Initial Model State O O",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.initial_model_state_o_o",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `O_o`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.species_labels"
},
{
"name": "model_state_s2",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.model_state_s2"
},
{
"name": "s2_a",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.s2_a"
},
{
"name": "orai1",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.orai1"
},
{
"name": "model_state_s4",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.model_state_s4"
},
{
"name": "model_state_oc",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.model_state_oc"
},
{
"name": "o_o",
"maps_to": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.o_o"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Chenxf2008 Cicr Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model_state"
],
"from": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model_summary"
],
"from": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model_species_labels"
],
"from": "systemsbiology_sbml_chenxf2008_cicr_biomd0000000202_model.species_labels"
}
],
"package": "chenxf2008-cicr",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "The model reproduces the plots in Figures 1 and 2. Note that the units of the time scale 'A' are not right in the paper, it was corrected by the curator.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagechenxf2008-cicr
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother