Physiome d99 - Biophysical Basis Enterocyte Homeostasis Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_u_e",
        "label": "Initial Model State U E (source u_e)",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.initial_model_state_u_e",
        "description": "Initial value for Model State U E (source u_e). Maps to source symbol `u_e`. Units: J_per_C. Naming evidence: source symbol is too ambiguous for a stronger public label.",
        "accepted_units": [
          "J_per_C"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.variable_labels"
      },
      {
        "name": "q_atp_ratio",
        "label": "Q ATP Ratio",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.q_atp_ratio",
        "description": "Q ATP Ratio. Maps to source symbol `Q_ATP_ratio`. Units: dim. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "q_bar_atp",
        "label": "Q Bar ATP",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.q_bar_atp",
        "description": "Q Bar ATP. Maps to source symbol `q_bar_ATP`. Units: dim. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "q_bar_adp",
        "label": "Q Bar ADP",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.q_bar_adp",
        "description": "Q Bar ADP. Maps to source symbol `q_bar_ADP`. Units: dim. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "c_atp",
        "label": "C ATP",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.c_atp",
        "description": "C ATP. Maps to source symbol `c_ATP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "k_atp",
        "label": "K ATP",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.k_atp",
        "description": "K ATP. Maps to source symbol `K_ATP`. Units: per_fmol. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "q_atp",
        "label": "Q ATP",
        "maps_to": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.q_atp",
        "description": "Q ATP. Maps to source symbol `q_ATP`. Units: fmol. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Physiome d99 - Biophysical Basis Enterocyte Homeostasis Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model",
      "parameters": {
        "model_path": "data/Epithelial_cell_fmol_v1.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model_state"
      ],
      "from": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model_summary"
      ],
      "from": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model_trajectory"
      ],
      "from": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model_variable_labels"
      ],
      "from": "physiology_cellml_the_biophysical_basis_of_enterocyte_homeostasis_d99_model.variable_labels"
    }
  ],
  "package": "physiomed99-biophysical-basis-enterocyte-homeostasis",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for The biophysical basis of enterocyte homeostasis. Public controls and outputs are mapped to real source symbols for transport physiology.",
  "schema_version": "2.0"
}