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This model is from the article: Reduction of off-flavor generation in soybean homogenates: a mathematical model. Mellor N , Bligh F , Chandler I , Hodgman C J.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_la",
"label": "Initial Model State La",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_model_state_la",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_1`."
},
{
"name": "initial_n_hexanal",
"label": "Initial N Hexanal",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_n_hexanal",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_15`."
},
{
"name": "initial_model_state_9_hod_s_z_e",
"label": "Initial Model State 9 Hod S Z E",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_model_state_9_hod_s_z_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_11`."
},
{
"name": "initial_model_state_9_hod_s_e_e",
"label": "Initial Model State 9 Hod S E E",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_model_state_9_hod_s_e_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_13`."
},
{
"name": "initial_model_state_9_hod_r_z_e",
"label": "Initial Model State 9 Hod R Z E",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_model_state_9_hod_r_z_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_12`."
},
{
"name": "initial_model_state_9_hod_r_e_e",
"label": "Initial Model State 9 Hod R E E",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.initial_model_state_9_hod_r_e_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_14`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.species_labels"
},
{
"name": "model_state_la",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.model_state_la"
},
{
"name": "n_hexanal",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.n_hexanal"
},
{
"name": "model_state_9_hod_s_z_e",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.model_state_9_hod_s_z_e"
},
{
"name": "model_state_9_hod_s_e_e",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.model_state_9_hod_s_e_e"
},
{
"name": "model_state_9_hod_r_z_e",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.model_state_9_hod_r_z_e"
},
{
"name": "model_state_9_hod_r_e_e",
"maps_to": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.model_state_9_hod_r_e_e"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Mellor2012 Lipooxygenasepathway Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model_state"
],
"from": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model_summary"
],
"from": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model_species_labels"
],
"from": "systemsbiology_sbml_mellor2012_lipooxygenasepathway_biomd0000000415_model.species_labels"
}
],
"package": "mellor2012-lipooxygenasepathway",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model is from the article: Reduction of off-flavor generation in soybean homogenates: a mathematical model. Mellor N , Bligh F , Chandler I , Hodgman C J.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemellor2012-lipooxygenasepathway
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother