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Source-faithful physiology lab for Kroll, 2000. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_pth",
"label": "Initial Pth",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.initial_pth",
"description": "Initial value for Pth. Maps to source symbol `P`. Units: dimensionless. Naming evidence: source metadata names `P` as `PTH`.",
"accepted_units": [
"dimensionless"
]
},
{
"name": "initial_interleukin_6_concentration",
"label": "Initial Interleukin 6 Concentration",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.initial_interleukin_6_concentration",
"description": "Initial value for Interleukin 6 Concentration. Maps to source symbol `IL6`. Units: dimensionless. Naming evidence: source metadata names `IL6` as `interleukin-6 concentration`.",
"accepted_units": [
"dimensionless"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.variable_labels"
},
{
"name": "pth",
"label": "Pth",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.pth",
"description": "Pth. Maps to source symbol `P`. Units: dimensionless. Naming evidence: source metadata names `P` as `PTH`."
},
{
"name": "interleukin_6_concentration",
"label": "Interleukin 6 Concentration",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.interleukin_6_concentration",
"description": "Interleukin 6 Concentration. Maps to source symbol `IL6`. Units: dimensionless. Naming evidence: source metadata names `IL6` as `interleukin-6 concentration`."
},
{
"name": "number_of_osteoblasts",
"label": "Number Of Osteoblasts",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.number_of_osteoblasts",
"description": "Number Of Osteoblasts. Maps to source symbol `X`. Units: dimensionless. Naming evidence: source metadata names `X` as `number of osteoblasts`."
},
{
"name": "number_of_osteoclasts",
"label": "Number Of Osteoclasts",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.number_of_osteoclasts",
"description": "Number Of Osteoclasts. Maps to source symbol `Z`. Units: dimensionless. Naming evidence: source metadata names `Z` as `number of osteoclasts`."
},
{
"name": "number_of_preosteoblasts",
"label": "Number Of Preosteoblasts",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.number_of_preosteoblasts",
"description": "Number Of Preosteoblasts. Maps to source symbol `Y`. Units: dimensionless. Naming evidence: source metadata names `Y` as `number of preosteoblasts`."
},
{
"name": "model_parameters_c",
"label": "Model Parameters C",
"maps_to": "physiology_cellml_kroll_2000_kroll2000_model.model_parameters_c",
"description": "Model Parameters C. Maps to source symbol `C`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Kroll2000 - Martin Mathematical Temporal Effects Parathyroid Hormone Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_kroll_2000_kroll2000_model",
"parameters": {
"model_path": "data/kroll_2000.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_kroll_2000_kroll2000_model_state"
],
"from": "physiology_cellml_kroll_2000_kroll2000_model.state"
},
{
"to": [
"visualisation.physiology_cellml_kroll_2000_kroll2000_model_summary"
],
"from": "physiology_cellml_kroll_2000_kroll2000_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_kroll_2000_kroll2000_model_trajectory"
],
"from": "physiology_cellml_kroll_2000_kroll2000_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_kroll_2000_kroll2000_model_variable_labels"
],
"from": "physiology_cellml_kroll_2000_kroll2000_model.variable_labels"
}
],
"package": "kroll2000-martin-mathematical-temporal-effects-parathyr-dc125ac1",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Kroll, 2000. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagekroll2000-martin-mathematical-temporal-effects-parathyr-dc125ac1
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother