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Source-faithful physiology lab for Kroll2000_PTH_BoneFormationDesorption. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_interleukin_6",
"label": "Initial Interleukin 6",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.initial_interleukin_6",
"description": "Initial value for Interleukin 6. Maps to source symbol `IL6`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "initial_model_state_p",
"label": "Initial Model State P (source P)",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.initial_model_state_p",
"description": "Initial value for Model State P (source P). Maps to source symbol `P`. Units: native SBML value. Naming evidence: source symbol is too ambiguous for a stronger public label."
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.trajectory"
},
{
"name": "species_labels",
"label": "Observable Labels",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.species_labels"
},
{
"name": "interleukin_6",
"label": "Interleukin 6",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.interleukin_6",
"description": "Interleukin 6. Maps to source symbol `IL6`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "model_state_p",
"label": "Model State P (source P)",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.model_state_p",
"description": "Model State P (source P). Maps to source symbol `P`. Units: native SBML value. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "model_state_x",
"label": "Model State X (source X)",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.model_state_x",
"description": "Model State X (source X). Maps to source symbol `X`. Units: native SBML value. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "model_state_y",
"label": "Model State Y (source Y)",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.model_state_y",
"description": "Model State Y (source Y). Maps to source symbol `Y`. Units: native SBML value. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "model_state_z",
"label": "Model State Z (source Z)",
"maps_to": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.model_state_z",
"description": "Model State Z (source Z). Maps to source symbol `Z`. Units: native SBML value. Naming evidence: source symbol is too ambiguous for a stronger public label."
}
]
},
"title": "Kroll2000 - Pth Boneformationdesorption Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model",
"parameters": {
"model_path": "data/MODEL1006230083.xml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model_state"
],
"from": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.state"
},
{
"to": [
"visualisation.physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model_summary"
],
"from": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.summary"
},
{
"to": [
"visualisation.physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model_trajectory"
],
"from": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.trajectory"
},
{
"to": [
"visualisation.physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model_species_labels"
],
"from": "physiology_sbml_kroll2000_pth_boneformationdesorption_model1006230083_model.species_labels"
}
],
"package": "kroll2000-pth-boneformationdesorption",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Kroll2000_PTH_BoneFormationDesorption. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagekroll2000-pth-boneformationdesorption
Created2026-05-23
Updated2026-06-13
physiologysbmlbiomodels_ebifaithfulvisualisationother