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Source-faithful physiology lab for Schneider, Shimayoshi, Amano, Matsuda, 2006. Public controls and outputs are mapped to real source symbols for calcium handling.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_rua_madp",
"label": "Initial Rua Madp",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.initial_rua_madp",
"description": "Initial value for Rua Madp. Maps to source symbol `RUA_MADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mM"
]
},
{
"name": "initial_rua_madppi",
"label": "Initial Rua Madppi",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.initial_rua_madppi",
"description": "Initial value for Rua Madppi. Maps to source symbol `RUA_MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mM"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.variable_labels"
},
{
"name": "rua_madp",
"label": "Rua Madp",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.rua_madp",
"description": "Rua Madp. Maps to source symbol `RUA_MADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "rua_madppi",
"label": "Rua Madppi",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.rua_madppi",
"description": "Rua Madppi. Maps to source symbol `RUA_MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ruamadppi",
"label": "Ruamadppi",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.ruamadppi",
"description": "Ruamadppi. Maps to source symbol `RUAMADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "madppi",
"label": "Madppi",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.madppi",
"description": "Madppi. Maps to source symbol `MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "alpha",
"label": "Alpha",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.alpha",
"description": "Alpha. Maps to source symbol `alpha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "q_adpr",
"label": "Q Adpr",
"maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.q_adpr",
"description": "Q Adpr. Maps to source symbol `Q_ADPR`. Units: mM_per_msec. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Schneider2006 - Mechanism Frank Starling Law Simulation Study Novel Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model",
"parameters": {
"model_path": "data/schneider_shimayoshi_amano_matsuda_2006.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_state"
],
"from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.state"
},
{
"to": [
"visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_summary"
],
"from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_trajectory"
],
"from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_variable_labels"
],
"from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.variable_labels"
}
],
"package": "schneider2006-mechanism-frank-starling-law-simulation-s-171b2c87",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Schneider, Shimayoshi, Amano, Matsuda, 2006. Public controls and outputs are mapped to real source symbols for calcium handling.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packageschneider2006-mechanism-frank-starling-law-simulation-s-171b2c87
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother