Shenorr2002 Feedforward And Gate Lab

{
  "io": {
    "inputs": [
      {
        "name": "input_signal_x",
        "label": "Input signal X",
        "maps_to": "shenorr2002_feedforward_and_gate.input_signal_x",
        "description": "Boundary species `X`, the source upstream input to the coherent feed-forward loop."
      }
    ],
    "outputs": [
      {
        "name": "intermediate_regulator_y",
        "maps_to": "shenorr2002_feedforward_and_gate.intermediate_regulator_y"
      },
      {
        "name": "response_operon_z",
        "maps_to": "shenorr2002_feedforward_and_gate.response_operon_z"
      },
      {
        "name": "state",
        "maps_to": "shenorr2002_feedforward_and_gate.state"
      },
      {
        "name": "summary",
        "maps_to": "shenorr2002_feedforward_and_gate.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "shenorr2002_feedforward_and_gate.species_labels"
      }
    ]
  },
  "title": "Shenorr2002 Feedforward And Gate Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "shenorr2002_feedforward_and_gate",
      "parameters": {
        "model_path": "data/BIOMD0000000316.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.shenorr2002_feedforward_and_gate_intermediate_regulator_y"
      ],
      "from": "shenorr2002_feedforward_and_gate.intermediate_regulator_y"
    },
    {
      "to": [
        "visualisation.shenorr2002_feedforward_and_gate_response_operon_z"
      ],
      "from": "shenorr2002_feedforward_and_gate.response_operon_z"
    },
    {
      "to": [
        "visualisation.shenorr2002_feedforward_and_gate_state"
      ],
      "from": "shenorr2002_feedforward_and_gate.state"
    },
    {
      "to": [
        "visualisation.shenorr2002_feedforward_and_gate_summary"
      ],
      "from": "shenorr2002_feedforward_and_gate.summary"
    },
    {
      "to": [
        "visualisation.shenorr2002_feedforward_and_gate_species_labels"
      ],
      "from": "shenorr2002_feedforward_and_gate.species_labels"
    }
  ],
  "package": "shenorr2002-feedforward-and-gate",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.1",
  "description": "coherent feed-forward loop. This is the coherent feed forward loop with an AND-gate like control of the response operon described in the article: Network motifs in the transcriptional regulation network of Escherichia coli Shai. It can be used to explore generegulation shen orr2002 feedforward and gate dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}