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This a model from the article: Macrophage dynamics in diabetic wound dealing. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "unresolved_immune_observable_1",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.unresolved_immune_observable_1"
},
{
"name": "phi_i",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.phi_i"
},
{
"name": "phi_r",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.phi_r"
},
{
"name": "unresolved_immune_observable_2",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.unresolved_immune_observable_2"
},
{
"name": "state",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.species_labels"
}
]
},
"title": "Waugh2006 - Diabetic Wound Healing - TGF-B Dynamics Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model_state"
],
"from": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.state"
},
{
"to": [
"visualisation.immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model_summary"
],
"from": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model_species_labels"
],
"from": "immunology_sbml_waugh2006_diabetic_wound_healing_tgf_b_dynamics_biomd0000000680_model.species_labels"
}
],
"caveats": "No scientifically safe input was exposed in this pass: the bundled SBML did not provide a headline species initial value or meaningfully named constant/intervention parameter that could be surfaced without turning raw source symbols into unsupported biological claims.",
"package": "waugh2006-diabetic-wound-healing-tgf-b-dynamics",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "This a model from the article: Macrophage dynamics in diabetic wound dealing. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagewaugh2006-diabetic-wound-healing-tgf-b-dynamics
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother