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Single-model lab wrapper for ferrel2011 - autonomous biochemical oscillator in cell cycle in Xenopus laevis v2. Computational modeling and the theory of nonlinear dynamical systems allow one to not simply describe the events of the cell cycle, but also to understand why these events occur, just as the theory of. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "cdk1_active",
"label": "CDK1 Active",
"maps_to": "cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model.cdk1_active",
"description": "Tracks CDK1 Active in the lab model via `cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model.cdk1_active`."
}
]
},
"title": "ferrel2011 - autonomous biochemical oscillator in cell cycle in Xenopus laevis v2 Lab",
"models": [
{
"path": "models/core",
"alias": "cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model_state"
],
"from": "cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model.state"
},
{
"to": [
"visualisation.cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model_summary"
],
"from": "cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model.summary"
},
{
"to": [
"visualisation.cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model_species_labels"
],
"from": "cellcycle_sbml_ferrel2011_autonomous_biochemical_oscillator_in_biomd0000000936_model.species_labels"
}
],
"package": "ferrel2011-cdk1-oscillator-v2",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for ferrel2011 - autonomous biochemical oscillator in cell cycle in Xenopus laevis v2. Computational modeling and the theory of nonlinear dynamical systems allow one to not simply describe the events of the cell cycle, but also to understand why these events occur, just as the theory of. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packageferrel2011-cdk1-oscillator-v2
Created2026-05-15
Updated2026-06-13
cellcyclesbmlbiomodels_ebifaithfulvisualisationother