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This is the basic model described in eq. 1 of the article: A model of phosphofructokinase and glycolytic oscillations in the pancreatic beta-cell.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_g6_p_f6_p",
"label": "Initial G6 P F6 P",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.initial_g6_p_f6_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G6P_F6P`."
},
{
"name": "initial_model_state_glc",
"label": "Initial Model State Glc",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.initial_model_state_glc",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GLC`."
},
{
"name": "initial_model_state_fbp",
"label": "Initial Model State Fbp",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.initial_model_state_fbp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FBP`."
},
{
"name": "initial_g3_p",
"label": "Initial G3 P",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.initial_g3_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G3P`."
},
{
"name": "initial_f6_p",
"label": "Initial F6 P",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.initial_f6_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `F6P`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.species_labels"
},
{
"name": "g6_p_f6_p",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.g6_p_f6_p"
},
{
"name": "glc",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.glc"
},
{
"name": "fbp",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.fbp"
},
{
"name": "g3_p",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.g3_p"
},
{
"name": "f6_p",
"maps_to": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.f6_p"
}
]
},
"tags": [
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Westermark2003 Pancreatic Glycosc Basic Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model_state"
],
"from": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model_summary"
],
"from": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model_species_labels"
],
"from": "systemsbiology_sbml_westermark2003_pancreatic_glycosc_basic_biomd0000000225_model.species_labels"
}
],
"package": "westermark2003-pancreatic-glycosc-basic",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This is the basic model described in eq. 1 of the article: A model of phosphofructokinase and glycolytic oscillations in the pancreatic beta-cell.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagewestermark2003-pancreatic-glycosc-basic
Created2026-05-17
Updated2026-06-13
physiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother