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This model is from the article: Antimalarial drug targets in Plasmodium falciparum predicted by stage-specific metabolic network analysis. Huthmacher C, Hoppe A, Bulik S, Holzhütter HG.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_erythrocyte_atp",
"label": "Initial Erythrocyte ATP",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.initial_erythrocyte_atp"
},
{
"name": "initial_erythrocyte_nad",
"label": "Initial Erythrocyte NAD",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.initial_erythrocyte_nad"
},
{
"name": "initial_erythrocyte_nadh",
"label": "Initial Erythrocyte NADH",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.initial_erythrocyte_nadh"
},
{
"name": "initial_pyruvate",
"label": "Initial Pyruvate",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.initial_pyruvate"
},
{
"name": "initial_glucose_1_phosphate",
"label": "Initial Glucose 1 Phosphate",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.initial_glucose_1_phosphate"
}
],
"outputs": [
{
"name": "state",
"label": "Tracked source state",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.species_labels"
},
{
"name": "erythrocyte_atp",
"label": "Erythrocyte ATP",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.erythrocyte_atp"
},
{
"name": "erythrocyte_nad",
"label": "Erythrocyte NAD",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.erythrocyte_nad"
},
{
"name": "erythrocyte_nadh",
"label": "Erythrocyte NADH",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.erythrocyte_nadh"
},
{
"name": "pyruvate",
"label": "Pyruvate",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.pyruvate"
},
{
"name": "glucose_1_phosphate",
"label": "Glucose 1 Phosphate",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.glucose_1_phosphate"
},
{
"name": "datp",
"label": "Datp",
"maps_to": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.datp"
}
]
},
"tags": [
"pharmacology",
"metabolism",
"systems-biology",
"hematology",
"sbml",
"tellurium",
"faithful",
"biomodels_ebi"
],
"title": "Huthmacher2010_HumanErythrocyte_MetabolicNetwork Lab",
"models": [
{
"path": "models/core",
"alias": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model",
"parameters": {
"model_path": "data/MODEL1111240001.xml",
"integration_step": 0.05
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model_state"
],
"from": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.state"
},
{
"to": [
"visualisation.pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model_summary"
],
"from": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.summary"
},
{
"to": [
"visualisation.pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model_species_labels"
],
"from": "pharmacology_sbml_huthmacher2010_humanerythrocyte_metabolicnetwork_model1111240001_model.species_labels"
}
],
"package": "huthmacher2010-human-erythrocyte-metabolism",
"runtime": {
"duration": 5,
"initial_inputs": {},
"communication_step": 0.5
},
"version": "1.0.0",
"description": "This model is from the article: Antimalarial drug targets in Plasmodium falciparum predicted by stage-specific metabolic network analysis. Huthmacher C, Hoppe A, Bulik S, Holzhütter HG.",
"schema_version": "2.0"
}Runtime
Duration5
Comms Step0.5
Runs
Total0
Completed0
Failed0
Metadata
Packagehuthmacher2010-human-erythrocyte-metabolism
Created2026-05-16
Updated2026-06-13
pharmacologymetabolismsystems-biologyhematologysbmltelluriumfaithfulbiomodels_ebivisualisationother