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Stortelder1997 - Thrombin Generation Amidolytic Activity Mathematical modelling of a part of the blood coagulation mechanism. This model is described in the article: Mathematical modelling in blood co.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_xa_atiii",
"label": "Initial Xa Atiii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_xa_atiii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Xa_ATIII`."
},
{
"name": "initial_i_ia_alpha2_m",
"label": "Initial I Ia Alpha2 M",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_i_ia_alpha2_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `IIa_alpha2M`."
},
{
"name": "initial_i_ia_atiii",
"label": "Initial I Ia Atiii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_i_ia_atiii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `IIa_ATIII`."
},
{
"name": "initial_model_state_ii",
"label": "Initial Model State Ii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_model_state_ii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `II`."
},
{
"name": "initial_model_state_pl",
"label": "Initial Model State Pl",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_model_state_pl",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PL`."
},
{
"name": "initial_model_state_rvv",
"label": "Initial Model State Rvv",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.initial_model_state_rvv",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RVV`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.species_labels"
},
{
"name": "xa_atiii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.xa_atiii"
},
{
"name": "i_ia_alpha2_m",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.i_ia_alpha2_m"
},
{
"name": "i_ia_atiii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.i_ia_atiii"
},
{
"name": "model_state_ii",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.model_state_ii"
},
{
"name": "model_state_pl",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.model_state_pl"
},
{
"name": "rvv",
"maps_to": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.rvv"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Stortelder1997 Thrombin Generation Amidolytic Activity Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model_state"
],
"from": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model_summary"
],
"from": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model_species_labels"
],
"from": "systemsbiology_sbml_stortelder1997_thrombin_generation_amidolytic_ac_biomd0000000358_model.species_labels"
}
],
"package": "stortelder1997-thrombin-generation-amidolytic-activity",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Stortelder1997 - Thrombin Generation Amidolytic Activity Mathematical modelling of a part of the blood coagulation mechanism. This model is described in the article: Mathematical modelling in blood co.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagestortelder1997-thrombin-generation-amidolytic-activity
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother